Scientific Publications


Uta Bohnebeck, Thierry Lombardot, Renzo Kottmann and Frank Oliver Glöckner. MetaMine – a tool  to detect and analyse gene neighbourhood in environmental context (accepted by BMC Bioinformatics in 7/2008)

Renzo Kottmann, Tanya Gray, Sean Murphy, Leonid Kagan, Saul Kravitz, Thierry Lombardot, Dawn Field, Frank Oliver Glöckner & the Genomic Standards Consortium (2008): A standard MIGS/MIMS compliant XML Schema: Towards the development of the Genomic Contextual Data Markup Language (GCDML); OMICS special issue, Volume 12, Number 2, 2008

Dawn Field et al.,  and ~60 authors from 46 institutions, incl.  Renzo Kottmann, Frank Oliver Glöckner, MPI Bremen, Microbial Genomics Group: The minimum information about a genome sequence (MIGS) specification.
NATURE BIOTECHNOLOGY VOLUME 26 NUMBER 5 MAY 2008; Published online 8 May 2008; doi:10.1038/1360.


Marcin Radom, Renzo Kottman, Agnieszka Rybarczyk, Piotr Formanowicz, Marta Szachniuk, Frank Oliver Gloeckner and Jacek Blazewicz (2007) Cerberus: A new information retrieval tool for marine metagenomics (submitted to Ecological Informatics in 2007

>Lombardot T, Kottmann R, Giuliani G, de Bono A, Addor N, Glöckner FO. MetaLook: a 3D visualisation software for marine ecological genomics. BMC Bioinformatics 2007 Oct 22;8:406.
[Pubmed Abstract at NCBI] [Free full text]


Lombardot T, Kottmann R, Pfeffer H, Richter M, Teeling H, Quast C, Glöckner FO. -- database resources for marine ecological genomics. Nucleic Acids Res. 2006 Jan 1;34 (Database issue): D390-393.
[Pubmed Abstract at NCBI] [Free full text]